Python for Computational Biology

There are several software packages and modules developed in Python. If some provided extended facilities and full-featured Graphical User Interfaces, others work on the language environment extending python native methods and attributes. Below you find a small list of such packages. Biopython - A set of freely available tools for…

Protein Interaction Databases and Web Tools

A highly comprehensive collection of protein interactions databases, predictors as well as web tools can be found here! Notably, PIBASE is a collection of all protein structural interfaces extracted from the Protein Data Bank and PISA structure databases. Both chain-chain and domain-domain (SCOP and CATH definitions) interfaces are detected. A…

My first ever paper is out!!

Big times for me! My first ever paper is out! It will be presented in Italy next month at the Workshop on Constraint Based Methods for Bioinformatics - WCB’11, which is a workshop satellite to the International Conference on Principles and Practice of Constraint Programming - CP 2011. Have a…